Combining dictionary- and rule-based approximate entity linking with tuned BioBERT
Ghadeer Mobasher, Lukrécia Mertová, Sucheta Ghosh, Olga Krebs, Bettina Heinlein, Wolfgang Müller
bioRxiv (2022). doi: 10.1101/2021.11.09.467905

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A network-based approach reveals the dysregulated transcriptional regulation in non-alcoholic fatty liver disease
Yang H., Arif M., Yuan M., Li X., Shong K., Türkez H., Nielsen J., Uhlén M., Borén J., Zhang C., Mardinoglu A.
iScience, 24(11):10322 (2021). doi: 10.1016/j.isci.2021.103222

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Combined metabolic activators therapy ameliorates liver fat in nonalcoholic fatty liver disease patients
Zeybel M., Altay O., Arif M., Li X., Yang H., Fredolini C., Akyildiz M., Saglam B., Gonenli M.G., Ural D., Kim W., Schwenk J.M, Zhang C., Shoaie S., Nielsen J., Uhlén M., Borén J., Mardinoglu A.
Mol. Syst Biol. 17(10): e10459 (2021). doi: 10.15252/msb.202110459

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Combined Metabolic Activators Decrease Liver Steatosis by Activating Mitochondrial Metabolism in Hamsters Fed with a High-Fat Diet
Yang H., Mayneris-Perxachs J., Boqué N., Del Bas J.M., Arola L., Yuan M., Türkez H., Uhlén M., Borén J., Zhang C., Mardinoglu A., Caimari A.
Biomedicines 9(10): 1440 (2021). doi: 10.3390/biomedicines9101440

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Thermodynamic limits and optimality of microbial growth
Saadat N.P., Nies T., Rousset Y., Ebenhöh O.
Entropy, 22(3):277 (2020). doi:10.3390/e22030277

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