Publications

Publications

 

2022

Combining dictionary- and rule-based approximate entity linking with tuned BioBERT
Ghadeer Mobasher, Lukrécia Mertová, Sucheta Ghosh, Olga Krebs, Bettina Heinlein, Wolfgang Müller
bioRxiv (2022). doi: 10.1101/2021.11.09.467905

Link to Article pdf 

 


2021

A network-based approach reveals the dysregulated transcriptional regulation in non-alcoholic fatty liver disease
Yang H., Arif M., Yuan M., Li X., Shong K., Türkez H., Nielsen J., Uhlén M., Borén J., Zhang C., Mardinoglu A.
iScience, 24(11):10322 (2021). doi: 10.1016/j.isci.2021.103222

Link to Article  pdf 

Combined metabolic activators therapy ameliorates liver fat in nonalcoholic fatty liver disease patients
Zeybel M., Altay O., Arif M., Li X., Yang H., Fredolini C., Akyildiz M., Saglam B., Gonenli M.G., Ural D., Kim W., Schwenk J.M, Zhang C., Shoaie S., Nielsen J., Uhlén M., Borén J., Mardinoglu A.
Mol. Syst Biol. 17(10): e10459 (2021). doi: 10.15252/msb.202110459

Link to Article    pdf  

Combined Metabolic Activators Decrease Liver Steatosis by Activating Mitochondrial Metabolism in Hamsters Fed with a High-Fat Diet
Yang H., Mayneris-Perxachs J., Boqué N., Del Bas J.M., Arola L., Yuan M., Türkez H., Uhlén M., Borén J., Zhang C., Mardinoglu A., Caimari A.
Biomedicines 9(10): 1440 (2021). doi: 10.3390/biomedicines9101440

Link to Article    pdf

 


2020

Thermodynamic limits and optimality of microbial growth
Saadat N.P., Nies T., Rousset Y., Ebenhöh O.
Entropy, 22(3):277 (2020). doi:10.3390/e22030277

Link to Article   pdf